Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924414.1_cds_XP_016472772.1_64972

CDS Infomation

[gene=LOC107794764] [db_xref=GeneID:107794764] [protein=putative transcription elongation factor SPT5 homolog 1] [protein_id=XP_016472772.1] [location=complement(join(13498..13533,13616..13670,14620..14689,14792..14886,14956..15004,15252..15410,15600..15696,15805..15948,16040..16192,16259..16307,16407..16504,16591..16746,16845..17205,17295..17365,17693..17773,17859..18017,18087..18233,18305..18546,18697..18796,18906..18911,19352..19384))] [gbkey=CDS]

Sequence

ATGGCCTTACCAAATAAAAGGAAAGTTGGGAAGCTTCAGGCAGTGGCATCAGCTTTGTGG
AAATCTTTAGTTCGATATACTCCATATGTCCACTTTGTGCTTGCTGAAATTTGTTTTCCA
CTCTGCGAGTTTGAAGCTAATTTCATAGTAGATGGTGGAGCAGAGATACCTGATGAAGAT
GGTGGCAGACGTGAATATCGTCACCGGCTGTTGCCACAAGAGGACCAAGAAGAAGACCTT
GAGGAGCTTACGAGAAGCATTAAGCAAAGATATGCGAGGTCAGCTCATGTGGAGTATGAT
GAGGAAGCAACAGATCATGTTGAGCAGCAAGCTCTCTTGCCATCTGTCAGGGATCCAAAG
CTGTGGATGGTGAAATGTGAGAGCGGTCATGAGAGGAAGGTTGCAGGTCGCCTAATGCAA
GAGGCAATAAATAGAGGATCAGAATTGCAAATTCGATCAGTTGTAGCCCTTGATCATCTT
CAGAACTATATATACATAGAAGCATGCAAAGAAGCCCATGTGAGGGAGGCTTGCAAGGGT
ATACACAATATTTATGCCGCTAACATAAAGCTAGTTCCCATCAAAGAGATGACTGATGTT
CTCACGGTTGAATGCGAAGCAGTTGATATTGCCAGAGGTACTTGGGTCAGAATGAAGAGA
GGAACTTACAAGGGAGACCTTGCAATGGCTGTGCATGTAAATGATATGGACCAGAGAGTC
ATTGTAAAATTAATTCCAAGGGTTGACTTACATGCTCTTGCAAACAAGGAAGGAAGGGAA
GTTCCAAAGAAGAAGGCAGTTATTCCTCCGCCACGCTTAATGAATATTGATGAAGCTAGA
AAGATGAAAATATTTGTGGAGCGTAAGCAAGACACGAGGACAGGTGACTATTTTGACAAT
ATTGGAAGTATGTCGTTCAGAGATGGTTTCTTGTACAAAACAGTGGCTCTGAAATCAACT
AGAACTCAGAACATACGTCCAACTTTTGATGAACTTGAGAAATTTCGCCAACTTGATGAG
GGTGGGAATGGCGATGTGGCTAGTCTATCCACTTTCTTTGCAAATAGGAAAAAGGTTCGT
TTTATGAAGGGTGACCATGTTATTGTGGTTAAGGGGGAACTCAGTAACATGAAAGGCCAT
GTAGAGAAAGTTGAAGAAGATATCGTTCATATCAGACTAGACCAGAAAGACCTTGCTGTG
GAAACTCTGGCTTTTAGTGACAAAGAGCTATGCAAGTACTTTGAGAAGGGAAATCACGTG
AAGGTAATATCTGGTTTGTATGAAGGTGCAACTGGTATGGTTGAATCTGTTGAGGGGCAT
GTGGTGAACATCATATCAGATATAACTAAGGAGCGTCTCCAGGTATTGGCTGATAAAGTT
GTTCAGAGTTCTGAAGTAACATCTGATCTCACTCGTATTGGGGAGTATGAGCTCCATGAC
CTTGTAAAACTAGACAATGAAAATTTTGGTGTGATTATACGTGTACACAGTGAAGCCTTC
CAGGTCCTTAAGGGTATGCCTGGTAGACCCGAGGTAGCACTTGTTGGACTTAGAGAGATC
AAAGAGAAAGTTGAGAAGAAAGGAAATGCCCAAGATCGCTTTAAGAACCAATTCGCGGTG
AAAGACATGGTAAAAGTTATTGAGGGTCCTTACAAAGGAAAACAAGGTCCTGTAAAACAC
ATCTTCAGAGGAATTGTTTTTATTCATGATCGCCATCATCTTGAGCATGCTGGTTTTATT
TGTGCCAAAAGCCAATCTTGTGAGTTGATTGGTGGCTCAGGGGAAAATTGTGATAGAAAT
GGTAAACCCTTCTCATCAAGACTTGTGCCTCTTAGAACTCCTTCCCGTGCTCCTCAATCT
CCAATGAGATCGTCTGGAGGTGGCCCGGCTATGAGCTATGGAGGCAGACAGAGAGGTGGA
AGAGGGGATGATGCTTTAGTTGGAGCTGATGTGAAAATTCGCCTTGGCCCCTTTAAAGGT
TGTAAGGGGCGCGTTGTTGCTATTCAAGGAACTTCAGTCCGCGTTGAACTGGAAGCCCAG
ATGAAAGTTGTTTCAGTTGATCGCAATCATATTGCAGATAATGATAGTGTGTCCACAGCA
TTCCGGGAACCATATAGACATGGTTTGGGAAGTGAAACACCATCACATCCTTCGAGGACT
CCACTTCATCCATCAATGACACCCATAAGAGATCATGGAGCAACACCTATCCATGATGGC
ATGAGGACGCCAATGGTTGACAGAGCATGGAACCCAATGAGTCCACCTAGGTACAATTGG
GAAGTTGGAAACGCTGCTTCTTGGGGGTCAAGTCCGGAATATCAGTTGTCTAGTCCTCGT
TCAACGGCATATCAGGAGTAG

Peptide Sequence

PEP ID

XP_016472772.1

PEP Infomation

PREDICTED: putative transcription elongation factor SPT5 homolog 1 [Nicotiana tabacum]

Sequence

MALPNKRKVGKLQAVASALWKSLVRYTPYVHFVLAEICFPLCEFEANFIVDGGAEIPDED
GGRREYRHRLLPQEDQEEDLEELTRSIKQRYARSAHVEYDEEATDHVEQQALLPSVRDPK
LWMVKCESGHERKVAGRLMQEAINRGSELQIRSVVALDHLQNYIYIEACKEAHVREACKG
IHNIYAANIKLVPIKEMTDVLTVECEAVDIARGTWVRMKRGTYKGDLAMAVHVNDMDQRV
IVKLIPRVDLHALANKEGREVPKKKAVIPPPRLMNIDEARKMKIFVERKQDTRTGDYFDN
IGSMSFRDGFLYKTVALKSTRTQNIRPTFDELEKFRQLDEGGNGDVASLSTFFANRKKVR
FMKGDHVIVVKGELSNMKGHVEKVEEDIVHIRLDQKDLAVETLAFSDKELCKYFEKGNHV
KVISGLYEGATGMVESVEGHVVNIISDITKERLQVLADKVVQSSEVTSDLTRIGEYELHD
LVKLDNENFGVIIRVHSEAFQVLKGMPGRPEVALVGLREIKEKVEKKGNAQDRFKNQFAV
KDMVKVIEGPYKGKQGPVKHIFRGIVFIHDRHHLEHAGFICAKSQSCELIGGSGENCDRN
GKPFSSRLVPLRTPSRAPQSPMRSSGGGPAMSYGGRQRGGRGDDALVGADVKIRLGPFKG
CKGRVVAIQGTSVRVELEAQMKVVSVDRNHIADNDSVSTAFREPYRHGLGSETPSHPSRT
PLHPSMTPIRDHGATPIHDGMRTPMVDRAWNPMSPPRYNWEVGNAASWGSSPEYQLSSPR
STAYQE

Transcript Sequence

Gene sequence data has not been registered.